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Yellow, brown or grey stains, yellowed waterline, liner losing its colour: these problems almost always have the same origin, the water. Some stains can be removed, others cannot. That is why it pays to know the causes so you can avoid them.

The essentials in 20 seconds
  • Yellow, brown, grey stains: most often metals (copper, iron, manganese).
  • Yellow waterline: often copper reacting with sun creams.
  • Liner losing its colour: too much chlorine, low pH, water too warm.
  • Prevention: metal sequestrant when filling, mains water, no copper-based products.

Identifying the stain

What you seeLikely causeWhat to do
Yellow, brown or rust-coloured stains, often on the floorIron or manganese (borehole water, well water, water of unknown origin)Metal sequestrant; stop using this water; try a metal stain remover
Yellow waterline, yellowish stainsCopper (copper-based algaecide or tablet) + sun creamsStop the copper-based product, metal sequestrant
Grey or blackish stainsMetal sulphides (metals coming out of solution)Metal sequestrant; ask for advice, often irreversible
Liner losing its colour, washed-out lookToo much chlorine, low pH, warm waterGet back to the right values; fading cannot be reversed
Faded patch in one spotChemical left against the liner (tablet, granules, stuck dispenser)Always dose through the skimmer; the faded patch is permanent
Rough white deposit on the waterlineLimescale (high TH)Suitable waterline cleaner + limescale sequestrant
⚠ Warning
Metal stains and fading are often irreversible. Liner manufacturers are clear: prevention is the only real solution.

Copper: the liner's enemy

Above 0.1 mg/L, copper causes yellow stains, a yellow waterline and metal sulphide stains. It gets into the water in two main ways:

  • treatment products that contain it: some algaecides (especially “shock” algaecides for resistant algae) and some multifunction tablets containing copper sulphate;
  • fill water loaded with metals (borehole, well, spring).

Read the composition of your products, especially algaecides and multi-action chlorine. With a liner, choose algaecides that are copper-free, preferably based on quaternary ammonium.

Fill water

Fill and top up with mains water (tap water). Borehole water or water of unknown origin must be chemically treated first to remove dissolved iron, copper or manganese. Otherwise these metals settle on the membrane and stain it.

☼ Piscine SAV tip
In every case, add a metal sequestrant each time you fill the pool. It traps dissolved metals so they are held by the filtration instead of sticking to the liner.

If stains are already there

  • Find the cause first: have the water tested (copper, iron) and check the composition of your products. Otherwise the stains will come back.
  • Add a metal sequestrant to stop new deposits.
  • For recent metal stains, a metal stain remover can help. Follow the instructions exactly (adjusting the pH before treatment, etc.).
  • Fading (washed-out liner) cannot be reversed: you can only stop it getting worse.

Products against metal stains

Impact Iron Tab metal sequestrant
Tablets that trap iron and dissolved metals, designed for PVC liners.
View product
HTH Metalstop liquid 3 L
Dual action: dissolved metals (iron, copper, manganese) and scale. Phosphate-free.
View product
Lo-Chlor Multi Stain Remover
Stain remover for iron, copper, manganese, tannin and cobalt stains.
View product

→ See all Treatment products

A copper-free algaecide

Impact Clari Clean flocculant + algaecide
Preventive algaecide, copper-free according to the manufacturer.
View product

Frequently asked questions

Why does my liner have yellow stains?

Most often because of copper or iron dissolved in the water. Copper comes from some treatment products or from metal-laden fill water; it also reacts with sun creams and turns the waterline yellow.

Do stains on a liner come off?

Recent metal stains can sometimes be reduced with a metal stain remover. Fading and old stains are generally irreversible.

Can I fill a liner pool with borehole water?

Liner manufacturers advise against it. If you have no other choice, the water must be treated for metals first, and a metal sequestrant is essential.

How do I know if a product contains copper?

Read the composition on the label or the product sheet. Be especially careful with algaecides for resistant algae and multifunction tablets.

What is the maximum copper level in a liner pool?

0.1 mg/L. Above that, permanent stains can appear.

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Sources: liner and reinforced membrane installation and care recommendations published by the manufacturers (“Liner installation / care advice” sheet, APF – Renolit Alkorplan, 2023), instructions for the products mentioned. This advice is general: if in doubt, refer to your liner's instructions and the product labels. Use biocidal products safely: always read the label and product information before use.
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